seqan-devel-1.4.2-45.fc34 in Fedora 34
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🠗 Changelog
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Changelog
| Date | Author | Change |
|---|---|---|
| 2021-01-27 | Fedora Release Engineering <releng at fedoraproject dot org> - 1.4.2-45 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild |
| 2020-08-19 | Jeff Law <law at redhat dot com> - 1.4.2-44 | - Force C++14 as this code is not C++17 ready |
| 2020-08-01 | Fedora Release Engineering <releng at fedoraproject dot org> - 1.4.2-43 | - Second attempt - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild |
| 2020-07-29 | Fedora Release Engineering <releng at fedoraproject dot org> - 1.4.2-42 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild |
| 2020-06-24 | Antonio Trande <sagitter at fedoraproject dot org> - 1.4.2-41 | - BuildRequires python3-setuptools |
| 2020-02-07 | Antonio Trande <sagitter at fedoraproject dot org> - 1.4.2-40 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild - Linker flag to liblemon |
| 2019-08-02 | Fedora Release Engineering <releng at fedoraproject dot org> - 1.4.2-39 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild - Do not perform the tests (need Python2 tools) |
| 2019-02-02 | Fedora Release Engineering <releng at fedoraproject dot org> - 1.4.2-38 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild |
Provides
- seqan-devel
- seqan-devel(x86-64)
Files
- usr/
- include/
- seqan/
- LICENSE
- align/
- INFO
- align_base.h
- align_cols.h
- align_config.h
- align_iterator_base.h
- align_metafunctions.h
- align_traceback.h
- alignment_algorithm_tags.h
- alignment_operations.h
- dp_algorithm_impl.h
- dp_band.h
- dp_cell.h
- dp_cell_affine.h
- dp_cell_linear.h
- dp_formula.h
- dp_formula_affine.h
- dp_formula_linear.h
- dp_matrix.h
- dp_matrix_navigator.h
- dp_matrix_navigator_score_matrix.h
- dp_matrix_navigator_score_matrix_sparse.h
- dp_matrix_navigator_trace_matrix.h
- dp_matrix_sparse.h
- dp_meta_info.h
- dp_profile.h
- dp_scout.h
- dp_setup.h
- dp_trace_segment.h
- dp_traceback_adaptor.h
- dp_traceback_impl.h
- evaluate_alignment.h
- gap_anchor.h
- gapped_value_type.h
- gaps_anchor.h
- gaps_array.h
- gaps_base.h
- gaps_iterator_anchor.h
- gaps_iterator_array.h
- gaps_iterator_base.h
- global_alignment_banded.h
- global_alignment_hirschberg_impl.h
- global_alignment_myers_hirschberg_impl.h
- global_alignment_myers_impl.h
- global_alignment_specialized.h
- global_alignment_unbanded.h
- local_alignment_banded.h
- local_alignment_banded_waterman_eggert_impl.h
- local_alignment_enumeration.h
- local_alignment_enumeration_banded.h
- local_alignment_enumeration_unbanded.h
- local_alignment_unbanded.h
- local_alignment_waterman_eggert_impl.h
- matrix_base.h
- align.h
- align_extend/
- align_extend.h
- align_extend_base.h
- dp_scout_xdrop.h
- align_extend.h
- align_profile/
- INFO
- add_to_profile.h
- score_profile_seq.h
- align_profile.h
- align_split/
- INFO
- align_split_interface.h
- dp_scout_split.h
- align_split.h
- alignment_free/
- INFO
- af_d2.h
- af_d2star.h
- af_d2z.h
- af_n2.h
- alignment_free_base.h
- alignment_free_comparison.h
- kmer_functions.h
- alignment_free.h
- arg_parse/
- INFO
- arg_parse_argument.h
- arg_parse_ctd_support.h
- arg_parse_doc.h
- arg_parse_exceptions.h
- arg_parse_option.h
- arg_parse_parse.h
- arg_parse_type_support.h
- argument_parser.h
- tool_doc.h
- xml_support.h
- arg_parse.h
- bam_io/
- INFO
- bam_alignment_record.h
- bam_alignment_record_util.h
- bam_header_record.h
- bam_index_bai.h
- bam_index_base.h
- bam_io_context.h
- bam_reader.h
- bam_sam_conversion.h
- bam_scanner_cache.h
- bam_stream.h
- bam_tags_dict.h
- bam_writer.h
- cigar.h
- read_bam.h
- read_sam.h
- sam_reader.h
- sam_writer.h
- write_bam.h
- write_sam.h
- xam_reader.h
- xam_writer.h
- bam_io.h
- basic/
- INFO
- aggregate_concept.h
- allocator_chunkpool.h
- allocator_interface.h
- allocator_multipool.h
- allocator_simple.h
- allocator_singlepool.h
- allocator_to_std.h
- alphabet_adapt_builtins.h
- alphabet_bio.h
- alphabet_concept.h
- alphabet_math.h
- alphabet_profile.h
- alphabet_qualities.h
- alphabet_residue.h
- alphabet_residue_funcs.h
- alphabet_residue_tabs.h
- alphabet_simple_type.h
- alphabet_storage.h
- array_construct_destruct.h
- basic_aggregate.h
- basic_allocator.h
- basic_alphabet.h
- basic_concept.h
- basic_container.h
- basic_debug.h
- basic_device.h
- basic_exception.h
- basic_fundamental.h
- basic_iterator.h
- basic_math.h
- basic_metaprogramming.h
- basic_parallelism.h
- basic_proxy.h
- basic_simd_vector.h
- basic_smart_pointer.h
- basic_tangle.h
- basic_type.h
- basic_view.h
- boost_preprocessor_subset.h
- builtin_functions.h
- concept_checking.h
- container_concept.h
- debug_helper.h
- debug_test_system.h
- fundamental_comparison.h
- fundamental_concepts.h
- fundamental_conversion.h
- fundamental_metafunctions.h
- fundamental_tags.h
- fundamental_transport.h
- holder_base.h
- holder_simple.h
- holder_tristate.h
- hosted_type_interface.h
- iterator_adapt_pointer.h
- iterator_adapt_std.h
- iterator_adaptor.h
- iterator_base.h
- iterator_concept.h
- iterator_interface.h
- iterator_position.h
- macro_deprecated.h
- math_functions.h
- math_log_space_value.h
- metaprogramming_control.h
- metaprogramming_enable_if.h
- metaprogramming_logic.h
- metaprogramming_math.h
- metaprogramming_type.h
- pair_base.h
- pair_bit_compressed.h
- pair_packed.h
- profiling.h
- proxy_base.h
- proxy_iterator.h
- test_system.h
- triple_base.h
- triple_packed.h
- tuple_base.h
- tuple_bit_compressed.h
- volatile_ptr.h
- basic.h
- basic_extras.h
- bed_io/
- INFO
- bed_io_context.h
- bed_record.h
- bed_stream.h
- read_bed.h
- write_bed.h
- bed_io.h
- consensus/
- INFO
- consensus_base.h
- consensus_library.h
- consensus_realign.h
- consensus_score.h
- consensus.h
- file/
- INFO
- chunk_collector.h
- cstream.h
- file_base.h
- file_cstyle.h
- file_filereader.h
- file_filereaderiterator.h
- file_format.h
- file_format_cgviz.h
- file_format_embl.h
- file_format_fasta.h
- file_format_fasta_align.h
- file_format_genbank.h
- file_format_guess.h
- file_format_mmap.h
- file_format_raw.h
- file_forwards.h
- file_interface.h
- file_mapping.h
- file_page.h
- meta.h
- stream.h
- stream_algorithms.h
- string_external.h
- string_mmap.h
- file.h
- find/
- INFO
- find2_base.h
- find_abndm.h
- find_ahocorasick.h
- find_base.h
- find_begin.h
- find_bndm.h
- find_bom.h
- find_hamming_simple.h
- find_horspool.h
- find_multi.h
- find_multiple_bfam.h
- find_multiple_shiftand.h
- find_myers_ukkonen.h
- find_pattern_base.h
- find_pex.h
- find_score.h
- find_set_horspool.h
- find_shiftand.h
- find_shiftor.h
- find_simple.h
- find_wild_shiftand.h
- find_wumanber.h
- find.h
- find_extras.h
- find_motif/
- INFO
- em_algorithm.h
- find_motif_base.h
- find_motif_epatternbranching.h
- find_motif_pms1.h
- find_motif_pmsp.h
- find_motif_projection.h
- frequency_distribution.h
- profile.h
- pseudocount_base.h
- pseudocount_mode_c.h
- pseudocount_mode_p.h
- sequence_model_types.h
- find_motif.h
- gff_io/
- INFO
- gff_io_base.h
- gff_io_context.h
- gff_stream.h
- gff_io.h
- graph_algorithms/
- INFO
- graph_algorithm.h
- graph_algorithm_heap_tree.h
- graph_algorithm_hmm.h
- graph_algorithm_lis_his.h
- graph_algorithms.h
- graph_align/
- INFO
- graph_algorithm_refine_align.h
- graph_algorithm_refine_aligngraph.h
- graph_algorithm_refine_annotation.h
- graph_algorithm_refine_exact.h
- graph_algorithm_refine_exact_iterative.h
- graph_algorithm_refine_fragment.h
- graph_algorithm_refine_inexact.h
- graph_algorithm_refine_scoring.h
- graph_impl_align.h
- graph_impl_align_adapt.h
- graph_align.h
- graph_msa/
- INFO
- graph_align_tcoffee_base.h
- graph_align_tcoffee_distance.h
- graph_align_tcoffee_guidetree.h
- graph_align_tcoffee_io.h
- graph_align_tcoffee_kmer.h
- graph_align_tcoffee_library.h
- graph_align_tcoffee_msa.h
- graph_align_tcoffee_progressive.h
- graph_align_tcoffee_refinement.h
- graph_msa.h
- graph_types/
- INFO
- graph_base.h
- graph_drawing.h
- graph_edgestump.h
- graph_idmanager.h
- graph_impl_automaton.h
- graph_impl_directed.h
- graph_impl_fragment.h
- graph_impl_hmm.h
- graph_impl_oracle.h
- graph_impl_tree.h
- graph_impl_trie.h
- graph_impl_undirected.h
- graph_impl_wordgraph.h
- graph_interface.h
- graph_iterator.h
- graph_iterator_adjacency.h
- graph_iterator_bfs.h
- graph_iterator_dfs.h
- graph_iterator_edge.h
- graph_iterator_outedge.h
- graph_iterator_vertex.h
- graph_property.h
- graph_utility_parsing.h
- graph_types.h
- index/
- INFO
- find2_index.h
- find_backtracking.h
- find_backtracking_exp.h
- find_index.h
- find_index_approx.h
- find_index_esa.h
- find_index_multiple.h
- find_index_qgram.h
- find_pigeonhole.h
- find_quasar.h
- find_swift.h
- index_base.h
- index_bwt.h
- index_childtab.h
- index_device.h
- index_dfi.h
- index_esa_algs.h
- index_esa_algs_multi.h
- index_esa_base.h
- index_esa_drawing.h
- index_esa_stree.h
- index_fm.h
- index_fm_compressed_sa.h
- index_fm_compressed_sa_iterator.h
- index_fm_doc.h
- index_fm_dox.h
- index_fm_lf_table.h
- index_fm_prefix_sum_table.h
- index_fm_rank_dictionary_bms.h
- index_fm_rank_dictionary_wt.h
- index_fm_rank_support_bit_string.h
- index_fm_rank_support_bit_string_iterator.h
- index_fm_right_array_binary_tree.h
- index_fm_right_array_binary_tree_iterator.h
- index_fm_sentinel_rank_dictionary.h
- index_fm_sparse_string.h
- index_fm_stree.h
- index_forwards.h
- index_lcp.h
- index_lcp_tree.h
- index_pizzachili.h
- index_pizzachili_find.h
- index_pizzachili_string.h
- index_qgram.h
- index_qgram_bucketrefinement.h
- index_qgram_openaddressing.h
- index_qgram_stree.h
- index_sa_btree.h
- index_sa_bwtwalk.h
- index_sa_lss.h
- index_sa_mm.h
- index_sa_qsort.h
- index_sa_stree.h
- index_sa_truncated.h
- index_shawarma.h
- index_shims.h
- index_skew3.h
- index_skew7.h
- index_skew7_multi.h
- index_view.h
- index_wotd.h
- iter_vstree_factory.h
- pipe_merger3.h
- pipe_merger7.h
- pizzachili_api.h
- pump_extender3.h
- pump_extender7.h
- pump_lcp_core.h
- pump_separator7.h
- radix.h
- repeat_base.h
- shape_base.h
- shape_gapped.h
- shape_onegapped.h
- shape_predefined.h
- shape_threshold.h
- index.h
- index_extras.h
- journaled_set/
- INFO
- journal_alignment_interface.h
- journal_alignment_traceback_adaptor.h
- journaled_set_base.h
- journaled_set_impl.h
- journaled_set_join.h
- journaled_set_join_config.h
- journaled_set_join_global_align_compact.h
- journaled_set_join_global_align_manhatten.h
- journaled_set_journal_trace_descriptor.h
- score_biaffine.h
- journaled_set.h
- map/
- INFO
- map_adapter_stl.h
- map_base.h
- map_chooser.h
- map_skiplist.h
- map_vector.h
- sumlist.h
- sumlist_mini.h
- sumlist_skip.h
- map.h
- math/
- math_common_factor.h
- math_operators.h
- math_rational.h
- math.h
- misc/
- INFO
- cmdparser/
- INFO
- cmdoption.h
- cmdparser.h
- cmdparser_ctd_support.h
- cmdparser_parse.h
- cmdparser_type_support.h
- edit_environment.h
- misc_accumulators.h
- misc_base.h
- misc_bit_twiddling.h
- misc_cmdparser.h
- misc_cuda.h
- misc_dequeue.h
- misc_interval_tree.h
- misc_map.h
- misc_memset.h
- misc_name_store_cache.h
- misc_parsing.h
- misc_set.h
- misc_sse2.h
- misc_svg.h
- misc_terminal.h
- misc_union_find.h
- priority_type_base.h
- priority_type_heap.h
- misc_extras.h
- modifier/
- INFO
- modifier_alphabet.h
- modifier_alphabet_expansion.h
- modifier_functors.h
- modifier_iterator.h
- modifier_reverse.h
- modifier_shortcuts.h
- modifier_string.h
- modifier_view.h
- modifier.h
- parallel/
- INFO
- parallel_algorithms.h
- parallel_atomic_misc.h
- parallel_atomic_primitives.h
- parallel_macros.h
- parallel_splitting.h
- parallel_tags.h
- parallel.h
- parse_lm/
- INFO
- local_match_store.h
- parse_blastn_tabular.h
- parse_lastz_general.h
- parse_stellar_gff.h
- parse_lm.h
- pipe/
- INFO
- pipe_base.h
- pipe_caster.h
- pipe_counter.h
- pipe_echoer.h
- pipe_edit_environment.h
- pipe_filter.h
- pipe_iterator.h
- pipe_joiner.h
- pipe_namer.h
- pipe_sampler.h
- pipe_shifter.h
- pipe_source.h
- pipe_tupler.h
- pool_base.h
- pool_mapper.h
- pool_sorter.h
- pipe.h
- platform/
- INFO
- platform_gcc.h
- platform_icc.h
- platform_mingw.h
- platform_nvcc.h
- platform_pgi.h
- platform_solaris.h
- platform_windows.h
- windows_stdint.h
- platform.h
- random/
- INFO
- ext_MersenneTwister.h
- random_base.h
- random_beta.h
- random_beta_kfunc.h
- random_geometric.h
- random_lognormal.h
- random_mt19937.h
- random_normal.h
- random_rng_functor.h
- random_shuffle.h
- random_uniform.h
- random.h
- roi_io/
- INFO
- read_roi.h
- roi_io_context.h
- roi_record.h
- write_roi.h
- roi_io.h
- score/
- INFO
- score_base.h
- score_edit.h
- score_matrix.h
- score_matrix_data.h
- score_matrix_io.h
- score_simple.h
- score.h
- seeds/
- INFO
- banded_chain_alignment.h
- banded_chain_alignment_impl.h
- banded_chain_alignment_profile.h
- banded_chain_alignment_scout.h
- banded_chain_alignment_traceback.h
- basic_iter_indirect.h
- seeds_base.h
- seeds_combination.h
- seeds_extension.h
- seeds_global_chaining.h
- seeds_global_chaining_base.h
- seeds_global_chaining_gusfield.h
- seeds_seed_base.h
- seeds_seed_chained.h
- seeds_seed_diagonal.h
- seeds_seed_set_base.h
- seeds_seed_set_non_scored.h
- seeds_seed_set_scored.h
- seeds_seed_set_unordered.h
- seeds_seed_simple.h
- seeds.h
- seq_io/
- INFO
- fai_index.h
- genomic_region.h
- guess_stream_format.h
- read_embl.h
- read_fasta_fastq.h
- read_genbank.h
- sequence_stream.h
- sequence_stream_impl.h
- simple_read_fasta.h
- write_fasta_fastq.h
- seq_io.h
- sequence/
- INFO
- adapt_array_pointer.h
- adapt_std_list.h
- adapt_std_string.h
- adapt_std_vector.h
- adapt_thrust_vector.h
- container_view.h
- iter_concat_virtual.h
- iterator_range.h
- segment_base.h
- segment_infix.h
- segment_prefix.h
- segment_suffix.h
- segment_utils.h
- sequence_concatenator.h
- sequence_forwards.h
- sequence_interface.h
- sequence_lexical.h
- sequence_shortcuts.h
- string_alloc.h
- string_array.h
- string_base.h
- string_block.h
- string_cstyle.h
- string_packed.h
- string_packed_old.h
- string_set_base.h
- string_set_concat_direct.h
- string_set_contat_direct_device.h
- string_set_contat_direct_view.h
- string_set_dependent_generous.h
- string_set_dependent_tight.h
- string_set_owner.h
- sequence.h
- sequence_extras.h
- sequence_journaled/
- INFO
- journal_entries_sorted_array.h
- journal_entries_unbalanced_tree.h
- journal_entries_unbalanced_tree_iterator.h
- journal_entries_unbalanced_tree_node.h
- journal_entry.h
- sequence_journaled.h
- sequence_journaled_iterator.h
- sequence_journaled.h
- statistics/
- INFO
- statistics_base.h
- statistics_markov_model.h
- statistics.h
- store/
- INFO
- store_align.h
- store_align_intervals.h
- store_all.h
- store_annotation.h
- store_base.h
- store_contig.h
- store_intervaltree.h
- store_io.h
- store_io_gff.h
- store_io_sam.h
- store_io_ucsc.h
- store_library.h
- store_matepair.h
- store_read.h
- store.h
- stream/
- INFO
- adapt_cstdio.h
- adapt_fstream.h
- adapt_iostream.h
- adapt_mmap.h
- adapt_sstream.h
- concept_stream.h
- file_stream.h
- is.h
- lexical_cast.h
- read.h
- read_auto_format.h
- read_sam.h
- record_reader_base.h
- record_reader_double.h
- record_reader_double_mmap.h
- record_reader_single.h
- record_reader_single_mmap.h
- stream_base.h
- stream_bgzf.h
- stream_bz2_file.h
- stream_char_array.h
- stream_gz_file.h
- stream_put.h
- tokenize.h
- write.h
- stream.h
- system/
- INFO
- file_async.h
- file_directory.h
- file_forwards.h
- file_sync.h
- system_base.h
- system_event.h
- system_forwards.h
- system_mutex.h
- system_sema.h
- system_thread.h
- system.h
- translation/
- translation.h
- translation_tables.h
- translation.h
- vcf_io/
- INFO
- read_vcf.h
- vcf_header.h
- vcf_header_record.h
- vcf_io_context.h
- vcf_record.h
- vcf_stream.h
- write_vcf.h
- vcf_io.h
- version.h
- seqan/
- share/
- doc/
- seqan-devel/
- README.rst
- seqan-devel/
- licenses/
- seqan-devel/
- BSD.txt
- GPLv3+.txt
- LGPLv3+.txt
- seqan-devel/
- doc/
- include/
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