bcftools-1.13-1.fc35 - Fedora Packages

Date	Author	Change
2021-07-23	John Marshall <jmarshall at hey dot com> - 1.13-1	- Update to BCFtools version 1.13 - Remove outdated patches which have been applied upstream - Update Python shebang rewriting to handle both "python" and "python3" - Package gff2gff.py script, added in BCFtools 1.11
2021-07-21	Fedora Release Engineering <releng at fedoraproject dot org> - 1.9-8	- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
2021-05-21	Jitka Plesnikova <jplesnik at redhat dot com> - 1.9-7	- Perl 5.34 rebuild
2021-01-26	Fedora Release Engineering <releng at fedoraproject dot org> - 1.9-6	- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
2020-07-27	Fedora Release Engineering <releng at fedoraproject dot org> - 1.9-5	- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
2020-06-22	Jitka Plesnikova <jplesnik at redhat dot com> - 1.9-4	- Perl 5.32 rebuild
2020-03-17	Jun Aruga <jaruga at redhat dot com> - 1.9-3	- Fix the build failure adding perl(FindBin) build dependency.
2020-01-28	Fedora Release Engineering <releng at fedoraproject dot org> - 1.9-2	- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
2019-11-19	Jun Aruga <jaruga at redhat dot com> - 1.9-1	- Exclude a CPU architecture s390x. - Add Conflicts tag for samtools < 1.0. - Align the field delimiter as 1 space. - Use additional RPM macros for Source0. - Add a logic to check if bcftools is built with system htslib. - Update comments for license.
2019-11-06	John Marshall <jmarshall at users dot sourceforge dot net> - 1.9-1	- New spec file for bcftools, now separate from samtools (#1767792). - Backported Python 3 and configure patches from later upstream development.

usr/
- bin/
  - bcftools
  - color-chrs.pl
  - gff2gff.py
  - guess-ploidy.py
  - plot-roh.py
  - plot-vcfstats
  - run-roh.pl
  - vcfutils.pl
- lib/
  - .build-id/
    - 05/
      - 6eea2bd2cab15b739e6f81eb9422c997f82c6f
    - 0a/
      - aac0ff2c9d5f2df96b7cc4c684c2b8c9599f12
    - 0f/
      - 36879d6230576d952661dfd701effd57074e70
    - 16/
      - 59fc20e2abeee9b3036c3dfa03a355db88c2d3
    - 1a/
      - afdcf243d7d4413dc2c6ea414d7bcb30e7b4ff
    - 1b/
      - cfcb23088c6a0e894fc861d9fb069808193558
    - 25/
      - 1976b481c732f33f7fd02184e4a2149b80c168
    - 32/
      - f034815d0d2a3c0b72b7c83e361b6098ee33c3
    - 35/
      - 337d2620c72c6aa08f9bb1f166268a6866aabb
    - 3b/
      - b83099bf9c869f23aeae44a5be202c42bcb2ac
    - 3d/
      - 01206aa00c2e4c6a07556e87c0b55ec6c5b370
    - 45/
      - 137e5811ff3bea11a42856f4961cf9f885740e
    - 46/
      - 74300d7847f3bd6b8aeba38f92497fdab3db38
    - 62/
      - d5941e6be4ce1b169d427912b218fa462ed3fe
    - 7a/
      - 764a7c3fa7d1b9e4567fbbb5a6bfacb65e76f5
    - 7d/
      - 4ef53e3f52fa2c2bcbee78b9eac24462981b9e
    - 82/
      - 505657a27786aa7dfd12c06862d717f8bbc752
    - 95/
      - f340d4d57b6fc3f018c9973bf4aced56844f8e
    - 99/
      - 5cd287b5cee7dc5d89ab8644a2992a5dd8bec3
    - 9b/
      - 12a561a3de2940140afda2ac2b5a8eab95a1cd
      - 775d63bfc837b5945e763b14aa1dea88bb5c28
    - a1/
      - b687955473ca295d4b934db6b44358baf5a76c
    - a9/
      - 0875ea7e323bb0cf80e5886601749836b4f1d6
    - ab/
      - fd7c600dbb50adf207e595dace120686cddaa7
    - b0/
      - 72c072461f5065c3d4e87cdb2f8b4b75f3b0c9
    - b2/
      - 733fbf9aa11b167c532df3e9d67718d4b2fcc6
    - b3/
      - 0f1d9114b06bba4679f704bdfebfffaba84579
    - b8/
      - 01da4bb464ea91850484ddb071e2a184af3d17
    - c1/
      - aa1d8f3be73a000f97cda047963d0db9094f39
    - c5/
      - 6aa98f27f466ed71f78f1981049f106ce3f640
    - cc/
      - b31efdc01569ae86d52d39279529fc373b4bdd
    - ce/
      - 48c06604a41fabac20c665c0019e890150b762
    - d7/
      - 1123885a5fb8dcc677d9b24bea605631b1cdad
    - d8/
      - 2401ce3422e71cf4cb1571ce5c468bc32e3f55
      - 3a4077193c941a03ce5861737c04f502882a7b
    - e7/
      - a9a5d81fc5f73e7e602263fe446439f38cb1e5
    - f4/
      - ff39679f8f877da3897e5ddb622a49ca86e12b
    - fc/
      - fd66b1ec064ced28188bd14f366d3a17394265
    - ff/
      - c2b776d4294f816942a47ddf4065a0089ec700
- libexec/
  - bcftools/
    - GTisec.so
    - GTsubset.so
    - ad-bias.so
    - add-variantkey.so
    - af-dist.so
    - allele-length.so
    - check-ploidy.so
    - check-sparsity.so
    - color-chrs.so
    - contrast.so
    - counts.so
    - dosage.so
    - fill-AN-AC.so
    - fill-from-fasta.so
    - fill-tags.so
    - fixploidy.so
    - fixref.so
    - frameshifts.so
    - guess-ploidy.so
    - gvcfz.so
    - impute-info.so
    - indel-stats.so
    - isecGT.so
    - mendelian.so
    - missing2ref.so
    - parental-origin.so
    - prune.so
    - remove-overlaps.so
    - scatter.so
    - setGT.so
    - smpl-stats.so
    - split-vep.so
    - split.so
    - tag2tag.so
    - trio-dnm2.so
    - trio-stats.so
    - trio-switch-rate.so
    - variantkey-hex.so
- share/
  - doc/
    - bcftools/
      - AUTHORS
      - NEWS
  - licenses/
    - bcftools/
      - LICENSE
  - man/
    - man1/
      - bcftools.1.gz

bcftools-1.13-1.fc35 in Fedora 35

Changelog

Dependencies

Provides

Files