R-GenomeInfoDb-1.28.0-2.fc35

Date	Author	Change
2021-07-21	Fedora Release Engineering <releng at fedoraproject dot org> - 1.28.0-2	- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
2021-06-16	Tom Callaway <spot at fedoraproject dot org> - 1.28.0-1	- update to 1.28.0 - Rebuilt for R 4.1.0
2021-02-03	Tom Callaway <spot at fedoraproject dot org> - 1.26.2-1	- update to 1.26.2
2021-01-25	Fedora Release Engineering <releng at fedoraproject dot org> - 1.24.0-3	- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
2020-07-27	Fedora Release Engineering <releng at fedoraproject dot org> - 1.24.0-2	- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
2020-06-08	Tom Callaway <spot at fedoraproject dot org> - 1.24.0-1	- update to 1.24.0 - rebuild for R 4
2020-01-28	Fedora Release Engineering <releng at fedoraproject dot org> - 1.22.0-3	- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
2019-11-21	Elliott Sales de Andrade <quantum dot analyst at gmail dot com> - 1.22.0-2	- Exclude Suggests for unavailable packages
2019-11-06	Tom Callaway <spot at fedoraproject dot org> - 1.22.0-1	- update to 1.22.0
2019-08-12	Elliott Sales de Andrade <quantum dot analyst at gmail dot com> - 1.16.0-5	- Remove explicit dependencies provided by automatic dependency generator

usr/
- share/
  - R/
    - library/
      - GenomeInfoDb/
        
        DESCRIPTION
        
        INDEX
        
        Meta/
        
        Rd.rds
        
        features.rds
        
        hsearch.rds
        
        links.rds
        
        nsInfo.rds
        
        package.rds
        
        vignette.rds
        
        NAMESPACE
        
        NEWS
        
        R/
        
        GenomeInfoDb
        
        GenomeInfoDb.rdb
        
        GenomeInfoDb.rdx
        
        doc/
        
        Accept-organism-for-GenomeInfoDb.R
        
        Accept-organism-for-GenomeInfoDb.Rnw
        
        Accept-organism-for-GenomeInfoDb.pdf
        
        GenomeInfoDb.R
        
        GenomeInfoDb.Rnw
        
        GenomeInfoDb.pdf
        
        index.html
        
        extdata/
        
        assembly_accessions.rda
        
        dataFiles/
        
        Arabidopsis_thaliana.txt
        
        Caenorhabditis_elegans.txt
        
        Canis_familiaris.txt
        
        Cyanidioschyzon_merolae.txt
        
        Drosophila_melanogaster.txt
        
        Homo_sapiens.txt
        
        Mus_musculus.txt
        
        Oryza_sativa.txt
        
        Populus_trichocarpa.txt
        
        README
        
        Rattus_norvegicus.txt
        
        Saccharomyces_cerevisiae.txt
        
        Zea_mays.txt
        
        genomeMappingTbl.csv
        
        help/
        
        AnIndex
        
        DEFAULT_CIRC_SEQS.html
        
        GenomeDescription-class.html
        
        GenomeDescription.html
        
        GenomeInfoDb-internals.html
        
        GenomeInfoDb.rdb
        
        GenomeInfoDb.rdx
        
        Seqinfo-class.html
        
        Seqinfo.html
        
        [,Seqinfo-method.html
        
        aliases.rds
        
        as.data.frame,Seqinfo-method.html
        
        as.data.frame.Seqinfo.html
        
        available.species.html
        
        bsgenomeName,GenomeDescription-method.html
        
        bsgenomeName.html
        
        checkCompatibleSeqinfo.html
        
        class:GenomeDescription.html
        
        class:Seqinfo.html
        
        coerce,DataFrame,Seqinfo-method.html
        
        coerce,data.frame,Seqinfo-method.html
        
        commonName,GenomeDescription-method.html
        
        commonName.html
        
        dropSeqlevels.html
        
        extractSeqlevels.html
        
        extractSeqlevelsByGroup.html
        
        fetchExtendedChromInfoFromUCSC.html
        
        genome,ANY-method.html
        
        genome,Seqinfo-method.html
        
        genome.html
        
        genome<-,ANY-method.html
        
        genome<-,Seqinfo-method.html
        
        genome<-.html
        
        genomeBuilds.html
        
        genomeStyles.html
        
        getChromInfoFromEnsembl.html
        
        getChromInfoFromNCBI.html
        
        getChromInfoFromUCSC.html
        
        intersect,Seqinfo,Seqinfo-method.html
        
        isCircular,ANY-method.html
        
        isCircular,Seqinfo-method.html
        
        isCircular.html
        
        isCircular<-,ANY-method.html
        
        isCircular<-,Seqinfo-method.html
        
        isCircular<-.html
        
        keepSeqlevels.html
        
        keepStandardChromosomes.html
        
        length,Seqinfo-method.html
        
        listOrganisms.html
        
        loadTaxonomyDb.html
        
        mapGenomeBuilds.html
        
        mapSeqlevels.html
        
        merge,NULL,Seqinfo-method.html
        
        merge,Seqinfo,NULL-method.html
        
        merge,Seqinfo,Seqinfo-method.html
        
        merge,Seqinfo,missing-method.html
        
        merge,missing,Seqinfo-method.html
        
        names,Seqinfo-method.html
        
        names<-,Seqinfo-method.html
        
        orderSeqlevels.html
        
        organism,GenomeDescription-method.html
        
        organism.html
        
        paths.rds
        
        provider,GenomeDescription-method.html
        
        provider.html
        
        providerVersion,GenomeDescription-method.html
        
        providerVersion.html
        
        rankSeqlevels.html
        
        registered_NCBI_assemblies.html
        
        registered_UCSC_genomes.html
        
        releaseDate,GenomeDescription-method.html
        
        releaseDate.html
        
        releaseName,GenomeDescription-method.html
        
        releaseName.html
        
        renameSeqlevels.html
        
        restoreSeqlevels.html
        
        seqinfo,GenomeDescription-method.html
        
        seqinfo.html
        
        seqinfo<-.html
        
        seqlengths,ANY-method.html
        
        seqlengths,Seqinfo-method.html
        
        seqlengths.html
        
        seqlengths<-,ANY-method.html
        
        seqlengths<-,Seqinfo-method.html
        
        seqlengths<-.html
        
        seqlevels,ANY-method.html
        
        seqlevels,Seqinfo-method.html
        
        seqlevels-wrappers.html
        
        seqlevels.html
        
        seqlevels0.html
        
        seqlevels<-,ANY-method.html
        
        seqlevels<-,Seqinfo-method.html
        
        seqlevels<-.html
        
        seqlevelsInGroup.html
        
        seqlevelsInUse,CompressedList-method.html
        
        seqlevelsInUse,Vector-method.html
        
        seqlevelsInUse.html
        
        seqlevelsStyle,ANY-method.html
        
        seqlevelsStyle,Seqinfo-method.html
        
        seqlevelsStyle,character-method.html
        
        seqlevelsStyle.html
        
        seqlevelsStyle<-,ANY-method.html
        
        seqlevelsStyle<-,Seqinfo-method.html
        
        seqlevelsStyle<-,character-method.html
        
        seqlevelsStyle<-.html
        
        seqnames,GenomeDescription-method.html
        
        seqnames,Seqinfo-method.html
        
        seqnames.html
        
        seqnames<-,Seqinfo-method.html
        
        seqnames<-.html
        
        show,GenomeDescription-method.html
        
        show,Seqinfo-method.html
        
        sortSeqlevels,ANY-method.html
        
        sortSeqlevels,character-method.html
        
        sortSeqlevels.html
        
        species,GenomeDescription-method.html
        
        species.html
        
        standardChromosomes.html
        
        summary,Seqinfo-method.html
        
        summary.Seqinfo.html
        
        html/
        
        00Index.html
        
        GenomeDescription-class.html
        
        GenomeInfoDb-internals.html
        
        R.css
        
        Seqinfo-class.html
        
        fetchExtendedChromInfoFromUCSC.html
        
        getChromInfoFromEnsembl.html
        
        getChromInfoFromNCBI.html
        
        getChromInfoFromUCSC.html
        
        loadTaxonomyDb.html
        
        mapGenomeBuilds.html
        
        rankSeqlevels.html
        
        seqinfo.html
        
        seqlevels-wrappers.html
        
        seqlevelsStyle.html
        
        registered/
        
        NCBI_assemblies/
        
        Apis_mellifera.R
        
        Arabidopsis_thaliana.R
        
        Betacoronavirus.R
        
        Bos_taurus.R
        
        Brassica_napus.R
        
        Caenorhabditis_elegans.R
        
        Callithrix_jacchus.R
        
        Camponotus_floridanus.R
        
        Canis_lupus_familiaris.R
        
        Chlamydomonas_reinhardtii.R
        
        Danio_rerio.R
        
        Drosophila_melanogaster.R
        
        Drosophila_virilis.R
        
        Galleria_mellonella.R
        
        Gallus_gallus.R
        
        Gasterosteus_aculeatus.R
        
        Harpegnathos_saltator.R
        
        Homo_sapiens.R
        
        Hordeum_vulgare.R
        
        Macaca_fascicularis.R
        
        Macaca_mulatta.R
        
        Madurella_mycetomatis.R
        
        Microtus_ochrogaster.R
        
        Monodelphis_domestica.R
        
        Mus_musculus.R
        
        Mustela_putorius_furo.R
        
        Pan_paniscus.R
        
        Pan_troglodytes.R
        
        Patiria_miniata.R
        
        Rattus_norvegicus.R
        
        Saccharomyces_cerevisiae.R
        
        Sus_scrofa.R
        
        Taeniopygia_guttata.R
        
        Vitis_vinifera.R
        
        UCSC_genomes/
        
        README.TXT
        
        apiMel1.R
        
        apiMel2.R
        
        bosTau1.R
        
        bosTau2.R
        
        bosTau3.R
        
        bosTau4.R
        
        bosTau6.R
        
        bosTau7.R
        
        bosTau8.R
        
        bosTau9.R
        
        calJac3.R
        
        canFam1.R
        
        canFam2.R
        
        canFam3.R
        
        canFam4.R
        
        ce10.R
        
        ce11.R
        
        ce2.R
        
        ce4.R
        
        ce6.R
        
        danRer10.R
        
        danRer11.R
        
        danRer5.R
        
        danRer6.R
        
        danRer7.R
        
        dm1.R
        
        dm2.R
        
        dm3.R
        
        dm6.R
        
        eboVir3.R
        
        galGal2.R
        
        galGal3.R
        
        galGal4.R
        
        galGal5.R
        
        galGal6.R
        
        gasAcu1.R
        
        hg15.R
        
        hg16.R
        
        hg17.R
        
        hg18.R
        
        hg19.R
        
        hg38.R
        
        macFas5.R
        
        mm10.R
        
        mm39.R
        
        mm8.R
        
        mm9.R
        
        monDom5.R
        
        musFur1.R
        
        panPan1.R
        
        panPan2.R
        
        panPan3.R
        
        panTro1.R
        
        panTro2.R
        
        panTro3.R
        
        panTro4.R
        
        panTro5.R
        
        panTro6.R
        
        rheMac10.R
        
        rheMac2.R
        
        rheMac3.R
        
        rheMac8.R
        
        rn1.R
        
        rn2.R
        
        rn3.R
        
        rn4.R
        
        rn5.R
        
        rn6.R
        
        sacCer1.R
        
        sacCer2.R
        
        sacCer3.R
        
        susScr11.R
        
        susScr2.R
        
        susScr3.R
        
        taeGut1.R
        
        taeGut2.R
        
        wuhCor1.R
        
        unitTests/
        
        test_Seqinfo-class.R
        
        test_mapGenomeBuilds.R
        
        test_rankSeqlevels.R
        
        test_seqlevels-wrappers.R
        
        test_seqlevelsStyle.R
        
        test_utils.R

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